afni most recent diff

# -*- coding: utf-8; mode: tcl; tab-width: 4; truncate-lines: t; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:et:sw=4:ts=4:sts=4

The afni Portfile 59664 2009-10-19 13:09:53Z snc  macports.org $

PortSystem	1.0

Name:		afni

Version:		2009.07.16.1049

distfiles	afni_src.tgz afni.1 3dClustBust.c                  TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.5-July3107.tgz  		libGLw.a.tiger

Category:	science

Maintainers:	snc openmaintainer

Description:	Analysis of Functional Neuro Images

Long Description:	This is a port of AFNI, Advanced Functional Neuro Imaging.  AFNI is a tool for analyzing 3 dimensional images, especially functional MRI images used in brain mapping research.

Homepage:	https://afni.nimh.nih.gov/

Master Sites:	https://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${version}/

extract.only	afni_src.tgz CA_EZ_v1.5-July3107.tgz

use_configure	no

Platform:           darwin

depends_lib	port:glib2  		port:glib1  		port:openmotif

depends_run	port:netpbm  		port:jpeg  		port:whirlgif  		port:endian

#build.dir	${workpath}/afni_src

worksrcdir	afni_src

build.target	vastness

Checksums:	afni_src.tgz md5 15786ad285b26bbd110e7892face6844  		afni.1 md5 02708ca46c60d6774af4796535e263ed  		TTatlas+tlrc.BRIK.gz md5 f5a107b049bc426af5342565f4e5beee  		TTatlas+tlrc.HEAD md5 a0ca787a2996d7e66548176808503ac5  		CA_EZ_v1.5-July3107.tgz md5 66341b819e9889ff60a9c3554123db68  		3dClustBust.c md5 e5f890f4e0894d6e16e3579d3ff89f49  		libGLw.a.tiger md5 c6c30011f603f7c055ba36156ca64d38

#patchfiles	patch-Makefile.INCLUDE

platform powerpc {

post-patch      {

                file copy ${filespath}/Makefile.ppc  			${worksrcpath}/Makefile

                file copy ${distpath}/3dClustBust.c ${worksrcpath}/

		reinplace -E "s|AFNI_\[0-9_\]+|${version}|g" ${worksrcpath}/AFNI_label.h

}

}

platform i386 {

post-patch      {

                file copy ${filespath}/Makefile.i386  			${worksrcpath}/Makefile

                file copy ${distpath}/3dClustBust.c ${worksrcpath}/

		reinplace -E "s|AFNI_\[0-9_\]+|${version}|g" ${worksrcpath}/AFNI_label.h

}

}

pre-build	{

		if { ! [file exists "/usr/X11R6/lib/libGLw.a"] } {

		    file copy ${distpath}/libGLw.a.tiger /usr/X11R6/lib/libGLw.a

		}

		file copy -force ${distpath}/afni.1 ${workpath}

#		file copy -force ${filespath}/afni.cshrc ${workpath}

#		file copy -force ${filespath}/afni.profile ${workpath}

		reinplace "s|%%PREFIX%%|${prefix}|g" ${workpath}/afni.1

#		reinplace "s|%%PREFIX%%|${prefix}|g" ${workpath}/afni.cshrc

#		reinplace "s|%%PREFIX%%|${prefix}|g" ${workpath}/afni.profile

#		reinplace "s|%%DATADIR%%|${prefix}/share/afni|g" ${workpath}/afni.cshrc

#		reinplace "s|%%DATADIR%%|${prefix}/share/afni|g" ${workpath}/afni.profile

		}

destroot {

# First, separate files that were all dumped into macosx_bin by the Makefile

		file mkdir ${worksrcpath}/macosx_lib

		eval file rename [glob ${worksrcpath}/macosx_bin/*.a] ${worksrcpath}/macosx_lib

		eval file rename [glob ${worksrcpath}macosx_bin/*.so] ${worksrcpath}/macosx_lib

		file mkdir ${worksrcpath}/macosx_include

		eval file rename [glob macosx_bin/*.h] macosx_include

		file mkdir ${worksrcpath}/macosx_share

		eval file rename [glob ${worksrcpath}/macosx_bin/*.jpg] ${worksrcpath}/macosx_share

		eval file rename [glob ${worksrcpath}/macosx_bin/*.txt] ${worksrcpath}/macosx_share

# Delete files that conflict with other ports

		eval file delete ${worksrcpath}/macosx_bin/cjpeg ${worksrcpath}/macosx_bin/djpeg  			${worksrcpath}/macosx_bin/whirlgif

		file rename ${worksrcpath}/macosx_bin/abut ${worksrcpath}/macosx_bin/afni_abut

# Install binaries and scripts

		xinstall -d -m 755 ${destroot}${prefix}/bin

		eval xinstall -m 755 [glob ${worksrcpath}/macosx_bin/*] ${destroot}${prefix}/bin

# Install libraries and plugins

		xinstall -d -m 755 ${destroot}${prefix}/lib/afni

		eval xinstall -m 644 [glob ${worksrcpath}/macosx_lib/*] ${destroot}${prefix}/lib/afni

# Install headers

		xinstall -d -m 755 ${destroot}${prefix}/include/afni

		eval xinstall -m 644 [glob ${worksrcpath}/macosx_include/*] ${destroot}${prefix}/include/afni

# Install miscellaneous files

		xinstall -d -m 755 ${destroot}${prefix}/share/afni

		eval xinstall -m 644 [glob ${worksrcpath}/macosx_share/*] ${destroot}${prefix}/share/afni

		eval xinstall -m 644 [glob ${distpath}/TTatlas*] ${destroot}${prefix}/share/afni

		eval xinstall -m 644 [glob ${workpath}/CA_EZ_v1.5-July3107/*] ${destroot}${prefix}/share/afni

# Install docs

		xinstall -d -m 755 ${destroot}${prefix}/share/doc/afni

		eval xinstall -m 644 [glob ${worksrcpath}/README.*] ${destroot}${prefix}/share/doc/afni

		xinstall -d -m 755 ${destroot}${prefix}/share/man/man1

		eval xinstall -m 644 ${workpath}/afni.1 ${destroot}${prefix}/share/man/man1

		xinstall -d -m 755 ${destroot}${prefix}/etc/mri

		xinstall -m 0555 ${workpath}/afni.cshrc ${destroot}${prefix}/etc/mri

		xinstall -m 0555 ${workpath}/afni.profile ${destroot}${prefix}/etc/mri

}

post-destroot {

        ui_msg "\n

===========================================================================

abut has been renamed to afni_abut to resolve a collision with the

unixstat port

---

AFNI_PLUGIN_PATH should be set to ${prefix}/lib/afni:${prefix}/share/afni

AFNI_GLOBAL_SESSION should be set to ${prefix}/share/afni.

===========================================================================\n"

}

livecheck.url       https://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/

livecheck.regex     (\\d+\\.\\d+\\.\\d+\\.\\d+)

%  cd /opt/local/bin/portslocation/dports/afni
%  sudo port install afni  
Password: 

--->  Fetching afni
--->  Verifying checksum for afni
--->  Extracting afni
--->  Configuring afni
--->  Building afni with target all

--->  Staging afni into destroot

--->  Installing afni
%  man afni
%  apropos afni
%  which afni
%  locate afni

afni most recent diff

version 2009.07.16.1049

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