ctb (C. Titus Brown)

Public Repositories (26)

• • Python
  • 1
  • 1

  hmmertree

  Exploring distance-matrix-based clustering of HMMER results

  Last updated Fri May 14 14:26:29 -0700 2010

  
• • Python
  • 1
  • 1

  guppy

  GED Lab Python scripts / bioinformatics trivia

  Last updated Thu May 06 21:10:57 -0700 2010

  
• • Python
  • 3
  • 3

  blastkit

  Last updated Thu Apr 29 19:08:00 -0700 2010

  
• • Python
  • 1
  • 1

  bags

  Bacterial genomics with pygr

  Last updated Mon Apr 26 08:24:39 -0700 2010

  
• • Python
  • 51
  • 9

  pony-build

  A simple continuous integration system, written in Python.

  Last updated Fri Apr 23 21:20:41 -0700 2010

  
• • Python
  • 4
  • 1

  screed

  a simple read-only sequence database, designed for short reads

  Last updated Wed Apr 21 12:55:10 -0700 2010

  
• • C
  • 1
  • 2

  Caper

  Forked from voidptr/Caper

  Fast short read alignment database

  Last updated Wed Apr 14 21:52:39 -0700 2010

  
• • Python
  • 5
  • 4

  pygr-draw

  Simple drawing code for pygr features

  Last updated Wed Apr 14 21:31:41 -0700 2010

  
• • JavaScript
  • 2
  • 2

  www-ged.msu.edu

  Lab Web site at MSU

  Last updated Thu Apr 08 09:28:48 -0700 2010

  
• • Python
  • 7
  • 26

  pygr

  Forked from cjlee112/pygr

  Python graph database framework for bioinformatics

  Last updated Sat Apr 03 20:00:14 -0700 2010

  
• • Shell
  • 1
  • 1

  www-pygr.org

  pygr Web site

  Last updated Tue Mar 30 07:23:40 -0700 2010

  
• • Python
  • 1
  • 1

  zounds

  Worker bee software for using BLAST and HMMER in Beowulf-style environments

  Last updated Mon Mar 15 08:21:22 -0700 2010

  
• • Python
  • 7
  • 2

  SomePackage

  A simple example package for thinking about test packaging.

  Last updated Mon Mar 08 22:02:40 -0800 2010

  
• • Python
  • 1
  • 1

  pygr-examples

  Last updated Mon Mar 08 10:26:07 -0800 2010

  
• • JavaScript
  • 2
  • 1

  tagnabbit

  Last updated Mon Mar 08 07:29:03 -0800 2010

  
• • 1
  • 1

  pony-build-git-test

  Test repository for pony-build's git client.

  Last updated Tue Feb 23 21:45:38 -0800 2010

  
• • Python
  • 1
  • 5

  pony_barn

  Forked from ericholscher/pony_barn

  Where we keep all the ponies.

  Last updated Sun Jan 17 18:34:11 -0800 2010

  
• • 1
  • 1

  ctb.github.com

  ctb's github site

  Last updated Sun Jan 03 23:27:48 -0800 2010

  
• • Python
  • 27
  • 5

  figleaf

  A code coverage recording and analysis tool for Python

  Last updated Sun Jan 03 22:40:45 -0800 2010

  
• • 6
  • 1

  twill

  A simple command-line Web browser, for testing and Web automation.

  Last updated Wed Dec 09 12:39:25 -0800 2009

  
• • Python
  • 1
  • 1

  willow

  Genome visualization on the cheap

  Last updated Thu Aug 13 12:06:06 -0700 2009

  
• • Python
  • 1
  • 3

  pygr-align

  Forked from eloseden/pygr-align

  Interface PYGR with common PW/MSA programs.

  Last updated Mon Aug 03 12:12:19 -0700 2009

  
• • Python
  • 1
  • 1

  lamprey-est-map

  Last updated Sun Jun 21 13:19:02 -0700 2009

  
• • Python
  • 1
  • 1

  lqueue

  Simple localhost FIFO queue

  Last updated Mon Jun 08 20:35:06 -0700 2009

  
• • Python
  • 1
  • 0

  scotch

  A simple WSGI recording & playback interface, with a proxy server.

  Last updated Mon Mar 30 13:57:40 -0700 2009

  
• • Python
  • 1
  • 1

  pinocchio

  Forked from infrared/pinocchio

  pinocchio is a set of extensions to the nose unit testing framework for Python

  Last updated Mon Mar 09 15:40:03 -0700 2009