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BiobaseEnsembl: Ensembl related datastructures and functions
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BiobaseEnsembl
BiobaseEnsembl: Ensembl related datastructures and functions
This library contains high through put sequencing and Ensembl-related functionality: - Datastructures to query Ensembl REST interface
Parser for GFF3
Datastructure for GFF3
[Skip to Readme]
Modules
- Biobase
- Ensembl
- REST
- Biobase.Ensembl.REST.Types
- REST
- Biobase.GFF3
- Biobase.GFF3.Export
- Biobase.GFF3.Import
- Biobase.GFF3.Types
- Biobase.GTF
- Biobase.GTF.Export
- Biobase.GTF.Import
- Biobase.GTF.Types
- Ensembl
Downloads
- BiobaseEnsembl-0.2.0.1.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
Maintainer's Corner
For package maintainers and hackage trustees
Candidates
- No Candidates
| Versions [RSS] | 0.1.0.0, 0.2.0.0, 0.2.0.1 |
|---|---|
| Change log | ChangeLog.md |
| Dependencies | aeson (>=1.0), attoparsec (>=0.13), base (>=4.7 && <5.0), binary (>=0.7), bytestring, cereal (>=0.4), containers, deepseq (>=1.3), directory, either-unwrap, text, vector (>=0.10), word8 [details] |
| Tested with | ghc ==8.6.5, ghc ==8.8.1 |
| License | GPL-3.0-only |
| Copyright | Florian Eggenhofer, 2018 |
| Author | Florian Eggenhofer |
| Maintainer | egg@informatik.uni-freiburg.de |
| Uploaded | by FlorianEggenhofer at 2020-01-09T19:39:11Z |
| Category | Bioinformatics |
| Home page | https://github.com/eggzilla/BiobaseEnsembl |
| Bug tracker | https://github.com/eggzilla/BiobaseEnsembl/issues |
| Source repo | head: git clone https://github.com/eggzilla/BiobaseEnsembl this: git clone https://github.com/eggzilla/BiobaseEnsembl/tree/0.2.0.1(tag 0.2.0.1) |
| Distributions | |
| Reverse Dependencies | 1 direct, 1 indirect [details] |
| Downloads | 1795 total (7 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating |
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| Status | Docs not available [build log] Last success reported on 2020-01-10 [all 3 reports] |
Readme for BiobaseEnsembl-0.2.0.1
[back to package description]BiobaseEnsembl 
This library contains Ensembl related functions and datastructures:
- GFF3
- EnsemblGenomes Query Datastructures