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Greene Laboratory · GitHub
Greene Laboratory
Greene Laboratory at the University of Colorado Anschutz
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Source code and data analyses for the Sci-Hub Coverage Study
Jupyter Notebook
298
39
BioBombe: Sequentially compressed gene expression features enhances biological signatures
Jupyter Notebook
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An easy-to-use, flexible website template for labs. https://doi.org/10.5281/zenodo.17228741
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A collaborative review of the emerging COVID-19 literature. Join the chat here:
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A collaboratively written review paper on deep learning, genomics, and precision medicine
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Training and evaluating a variational autoencoder for pan-cancer gene expression data
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Repositories
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scrumlord
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Continuous administration of the Greene Lab's electronic scrum
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2
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Updated Jan 17, 2026
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1
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Updated Jan 6, 2026
deconvolution_sc_sn_comparison
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This repository contains all code for the work done in the research paper titled "Integrating single-cell and single-nucleus datasets improves bulk RNA-seq deconvolution"
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Updated Jan 6, 2026
onboarding
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Onboarding materials for the Greene Lab
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CC0-1.0
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Updated Dec 15, 2025
multi-dwpc
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This repository contains scripts testing aggregate degree weighted path count (DWPC) statistics.
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1
1
0
0
Updated Dec 10, 2025
HGSOC_Adipocytes
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Deconvolution of bulk RNA-seq samples of HGSOC including adipocytes.
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1
Updated Dec 1, 2025
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BSD-3-Clause
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Updated Nov 20, 2025
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525
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Updated Nov 17, 2025
greenelab/lwt-poster’s past year of commit activity
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Updated Sep 30, 2025
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Updated Sep 25, 2025
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