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Releases · google/nucleus · GitHub
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Releases: google/nucleus
Releases · google/nucleus
Nucleus 0.6.0
- Upgrade to support TensorFlow 2.6.0 specifically.
- Upgrade to Python 3.8.
This release was tested on Ubuntu 20.04.
Assets 2
5 people reacted
Nucleus 0.5.9
New in 0.5.9:
- Upgrade to support TensorFlow 2.5.0 specifically.
Assets 2
Nucleus 0.5.8
New in 0.5.8:
- Update
util/vis.pyto use updated channel names. - Support
MED_DP(median DP) field for aVariantCall.
Assets 2
Nucleus 0.5.7
New in 0.5.7:
- Add automatic pileup curation functionality in
util/vis.py. - Upgrade protobuf settings to support TensorFlow 2.4.0 specifically.
Assets 2
Nucleus 0.5.6
New in 0.5.6:
- Upgrade to protobuf 3.9.2 to support TensorFlow 2.3.0 specifically.
Assets 2
Nucleus 0.5.5
New in 0.5.5:
- Upgrade protobuf settings to support TensorFlow 2.2.0 specifically.
Assets 2
Nucleus 0.5.4
New in 0.5.4:
- Upgrade to protobuf 3.8.0 to support TensorFlow 2.1.0.
- Add explicit .close() method to TFRecordWriter.
Assets 2
Nucleus 0.5.3
New in 0.5.3:
- Fixes memory leaks in message_module.cc.
- Updates setup.py to install .egg-info directory for pip 20.2+ compatibility.
- Pins TensorFlow to 2.0.0 for protobuf version compatibility.
- Pins setuptools to 49.6.0 to avoid breaking changes of setuptools 50.
Assets 2
Nucleus 0.5.2
New in 0.5.2:
- Upgrades htslib dependency from 1.9 to 1.10.2.
- More informative error message for failed SAM header parsing.
util/vis.pynow supports saving images to Google Cloud Storage.
Assets 2
Nucleus 0.5.1
New in 0.5.1:
- Updated documentation.
- Added list of read-advancing CIGAR ops.
- Added label_from_example utility in nucleus.util.vis.
- Added simplify_variant_alleles in nucleus.util.variant_utils.
Assets 2
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