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TCLamnidis (Thiseas C. Lamnidis) · GitHub
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Thiseas C. Lamnidis TCLamnidis
-
Max Planck Institute for Evolutionary Anthropology
- Leipzig, Germany
- https://orcid.org/0000-0003-4485-8570
Highlights
- Pro
Organizations
Pinned Loading
-
EigenStratDatabaseTools
EigenStratDatabaseTools PublicA set of tools to compare and manipulate the contents of EingenStrat databases, and to calculate SNP coverage statistics in such databases.
Python 6
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Sex.DetERRmine
Sex.DetERRmine PublicA python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at specified SNPs.
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BareBonesBash
BareBonesBash PublicA basic Bash tutorial by @jfy133, @aidaanva and @TCLamnidis.
HTML 2
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AdmixturePlotter
AdmixturePlotter PublicAn R script to generate plots for ADMIXTURE runs, for multiple K values.
-
ContaminateGenotypes
ContaminateGenotypes PublicA simple python script to contaminate Eigenstrat genotypes.
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