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Observational Health Data Sciences and Informatics · GitHub
Observational Health Data Sciences and Informatics
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Definition and DDLs for the OMOP Common Data Model (CDM)
HTML
1k
483
Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.
PLpgSQL
257
75
ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data
JavaScript
302
147
Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.
C++
41
33
An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.
R
89
69
An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.
R
212
91
Repositories
Showing 10 of 367 repositories
OHDSI/OmopSketch’s past year of commit activity
R
3
Apache-2.0
2
7
4
Updated Jan 21, 2026
circe-be
Public
CIRCE is a cohort definition and syntax compiler tool for OMOP CDMv5
OHDSI/circe-be’s past year of commit activity
Java
11
Apache-2.0
15
8
7
Updated Jan 21, 2026
OHDSI/PhenotypeR’s past year of commit activity
R
5
Apache-2.0
1
47
2
Updated Jan 21, 2026
Vocabulary-v5.0
Public
Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.
OHDSI/Vocabulary-v5.0’s past year of commit activity
PLpgSQL
257
Unlicense
75
245
14
Updated Jan 21, 2026
OHDSI/Data2Evidence’s past year of commit activity
TypeScript
31
Apache-2.0
8
245
44
Updated Jan 20, 2026
Keeper
Public
A tool to support case validation
OHDSI/Keeper’s past year of commit activity
R
6
2
3
0
Updated Jan 20, 2026
OHDSI/ohdsi-uk’s past year of commit activity
R
0
1
1
0
Updated Jan 20, 2026
OHDSI/OmopViewer’s past year of commit activity
OHDSI/OmopCheckout’s past year of commit activity
R
0
Apache-2.0
0
5
0
Updated Jan 20, 2026
DbDiagnostics
Public
Package to profile a database and execute data diagnostics based on individual analysis settings
OHDSI/DbDiagnostics’s past year of commit activity
R
6
Apache-2.0
6
9
0
Updated Jan 20, 2026
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