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Releases · soedinglab/MMseqs2-App · GitHub
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Releases: soedinglab/MMseqs2-App
Releases · soedinglab/MMseqs2-App
MMseqs2 Server Release 8-c4b9644
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Important
The desktop app is currently not maintained. Currently, only the backend-only mode for ColabFold and the MMseqs2 and Foldseek webservers are being maintained. We will revisit the desktop app at some point in the future.
This release contains a large number of changes that introduce support for the ColabFold MSA server and the Foldseek webserver.
Assets 2
MMseqs2 App Release 7-8e1704f
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- Fix broken result output with multiple queries (only first query was shown)
- Query list now fully fills its vertical space
- Improve result view with very long target names
Assets 6
MMseqs2 App Release 6-fb25737
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- Sync to MMseqs2 release 13
- Increase stability of
-local
mode -local
mode can start multiple workers- Visualize pairwise alignment similarity
- Fix missing
fclose
calls which would eventually result in file handle exhaustion and crashes - Updated example database setup scripts in
docker-compose/examples
- Electron works again
- macOS Universal (arm64 + x64) and Linux arm64 are now supported in the Electron app
- Result view can be built standalone (included in MMseqs2
convertalis
) - Updated dependencies
Assets 6
MMseqs2 App Release 5-ac17aa6
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- Sync with MMseqs2 release 11
- Update dependencies including Electron
Assets 2
MMseqs2 App Release 4-cfa20fc
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- Sync to MMseqs2 release 10 and fix compatibility issues
- Empty results should not give error messages anymore
- Windows version was not working (still slower than Linux and Mac)
Passing--threads 1
at database creation or in params file will improve performance for most searches. We are investing how to fix Windows performance
Assets 11
MMseqs2 App Release 3-7600600
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- Corrected multiple errors preventing the app from actually running
- Fix macOS signing
Assets 12
MMseqs2 App Release 2-01904a7
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v2-01904a7 Fix docker-compose to specific image version by default
Assets 12
v1-c0325dc
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Make sure FASTA file is written only after the jobfolder is created f…
Assets 12
0-53bd5d1
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v0-53bd5d1 Specify mmseqs2 commit to use
Assets 6
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