HTTP/2 200
date: Tue, 29 Jul 2025 11:22:45 GMT
content-type: text/html; charset=utf-8
vary: X-PJAX, X-PJAX-Container, Turbo-Visit, Turbo-Frame, X-Requested-With,Accept-Encoding, Accept, X-Requested-With
etag: W/"eaed49811ee307aaccfc81a9887d0473"
cache-control: max-age=0, private, must-revalidate
strict-transport-security: max-age=31536000; includeSubdomains; preload
x-frame-options: deny
x-content-type-options: nosniff
x-xss-protection: 0
referrer-policy: origin-when-cross-origin, strict-origin-when-cross-origin
content-security-policy: default-src 'none'; base-uri 'self'; child-src github.githubassets.com github.com/assets-cdn/worker/ github.com/assets/ gist.github.com/assets-cdn/worker/; connect-src 'self' uploads.github.com www.githubstatus.com collector.github.com raw.githubusercontent.com api.github.com github-cloud.s3.amazonaws.com github-production-repository-file-5c1aeb.s3.amazonaws.com github-production-upload-manifest-file-7fdce7.s3.amazonaws.com github-production-user-asset-6210df.s3.amazonaws.com *.rel.tunnels.api.visualstudio.com wss://*.rel.tunnels.api.visualstudio.com objects-origin.githubusercontent.com copilot-proxy.githubusercontent.com proxy.individual.githubcopilot.com proxy.business.githubcopilot.com proxy.enterprise.githubcopilot.com *.actions.githubusercontent.com wss://*.actions.githubusercontent.com productionresultssa0.blob.core.windows.net/ productionresultssa1.blob.core.windows.net/ productionresultssa2.blob.core.windows.net/ productionresultssa3.blob.core.windows.net/ productionresultssa4.blob.core.windows.net/ productionresultssa5.blob.core.windows.net/ productionresultssa6.blob.core.windows.net/ productionresultssa7.blob.core.windows.net/ productionresultssa8.blob.core.windows.net/ productionresultssa9.blob.core.windows.net/ productionresultssa10.blob.core.windows.net/ productionresultssa11.blob.core.windows.net/ productionresultssa12.blob.core.windows.net/ productionresultssa13.blob.core.windows.net/ productionresultssa14.blob.core.windows.net/ productionresultssa15.blob.core.windows.net/ productionresultssa16.blob.core.windows.net/ productionresultssa17.blob.core.windows.net/ productionresultssa18.blob.core.windows.net/ productionresultssa19.blob.core.windows.net/ github-production-repository-image-32fea6.s3.amazonaws.com github-production-release-asset-2e65be.s3.amazonaws.com insights.github.com wss://alive.github.com api.githubcopilot.com api.individual.githubcopilot.com api.business.githubcopilot.com api.enterprise.githubcopilot.com; font-src github.githubassets.com; form-action 'self' github.com gist.github.com copilot-workspace.githubnext.com objects-origin.githubusercontent.com; frame-ancestors 'none'; frame-src viewscreen.githubusercontent.com notebooks.githubusercontent.com; img-src 'self' data: blob: github.githubassets.com media.githubusercontent.com camo.githubusercontent.com identicons.github.com avatars.githubusercontent.com private-avatars.githubusercontent.com github-cloud.s3.amazonaws.com objects.githubusercontent.com release-assets.githubusercontent.com secured-user-images.githubusercontent.com/ user-images.githubusercontent.com/ private-user-images.githubusercontent.com opengraph.githubassets.com copilotprodattachments.blob.core.windows.net/github-production-copilot-attachments/ github-production-user-asset-6210df.s3.amazonaws.com customer-stories-feed.github.com spotlights-feed.github.com objects-origin.githubusercontent.com *.githubusercontent.com; manifest-src 'self'; media-src github.com user-images.githubusercontent.com/ secured-user-images.githubusercontent.com/ private-user-images.githubusercontent.com github-production-user-asset-6210df.s3.amazonaws.com gist.github.com; script-src github.githubassets.com; style-src 'unsafe-inline' github.githubassets.com; upgrade-insecure-requests; worker-src github.githubassets.com github.com/assets-cdn/worker/ github.com/assets/ gist.github.com/assets-cdn/worker/
server: github.com
content-encoding: gzip
accept-ranges: bytes
set-cookie: _gh_sess=7e1pm9wI7nHZVnXiaX1BHjN%2FllJLX5FHQmNNjw9ugt4uIAaHFpEYF7tGetAmOZPiEs3fRYcl14lIu5lNoWbgtO8%2BfVXEYNWBkdNG%2FOg%2BDUMRDRfG1iVSvG8LTTV5j8QFZfvhrjxluwP2%2FHAVPihBl22rNJ5IQnu55KdH8SfHVxffNEOz9AUfqmcWB%2Bla9k73Ym%2BURWa5ngtSX%2FqiGUOVZdlbEjE%2BhBGIrx7BVHOhBKBEPS84pQjr0I%2BO0UA8INrAPq1CqGSkrlhtmVm1aQ47Dw%3D%3D--MnRPqM7zi5UdsPJ%2B--LHqaPPMbqzQ30YwSnFhJ8A%3D%3D; Path=/; HttpOnly; Secure; SameSite=Lax
set-cookie: _octo=GH1.1.1108156031.1753788164; Path=/; Domain=github.com; Expires=Wed, 29 Jul 2026 11:22:44 GMT; Secure; SameSite=Lax
set-cookie: logged_in=no; Path=/; Domain=github.com; Expires=Wed, 29 Jul 2026 11:22:44 GMT; HttpOnly; Secure; SameSite=Lax
x-github-request-id: 971E:17B9D8:9986A7:B84E77:6888AF04
scverse · GitHub
scverse
Foundational tools for omics data in the life sciences
scverse ® is a community that develops and maintains foundational tools for single-cell omics data analysis in primarily Python.
Here's how to get started:
Pinned
Loading
Single-cell analysis in Python. Scales to >100M cells.
Python
2.1k
648
Annotated data.
Python
642
167
Deep probabilistic analysis of single-cell and spatial omics data
Python
1.4k
399
Spatial Single Cell Analysis in Python
Python
499
97
An open and interoperable data framework for spatial omics data
Python
293
66
A scanpy extension to analyse single-cell TCR and BCR data.
Python
235
39
Repositories
Showing 10 of 62 repositories
scverse/scanpy-tutorials’s past year of commit activity
scanpy
Public
Single-cell analysis in Python. Scales to >100M cells.
scverse/scanpy’s past year of commit activity
scverse/anndata’s past year of commit activity
scverse/scverse.github.io’s past year of commit activity
HTML
3
8
15
2
Updated Jul 29, 2025
scverse/fast-array-utils’s past year of commit activity
scverse/ecosystem-packages’s past year of commit activity
Python
25
BSD-3-Clause
55
7
10
Updated Jul 29, 2025
scverse/cookiecutter-scverse-instance’s past year of commit activity
Python
4
BSD-3-Clause
4
0
2
Updated Jul 29, 2025
scverse/cookiecutter-scverse’s past year of commit activity
Python
81
BSD-3-Clause
12
22
1
Updated Jul 29, 2025
prelude-runner
Public
Jupyter notebook runner that executes preludes before each cell
scverse/prelude-runner’s past year of commit activity
Python
1
Apache-2.0
0
1
0
Updated Jul 29, 2025
scverse/anndata-plot’s past year of commit activity
Python
9
MIT
3
1
3
Updated Jul 29, 2025
Most used topics
Loading…
You can’t perform that action at this time.