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scverse · GitHub
scverse
Foundational tools for omics data in the life sciences
scverse ® is a community that develops and maintains foundational tools for single-cell omics data analysis in primarily Python.
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Single-cell analysis in Python. Scales to >100M cells.
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649
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An open and interoperable data framework for spatial omics data
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293
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A scanpy extension to analyse single-cell TCR and BCR data.
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235
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Repositories
Showing 10 of 62 repositories
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HTML
3
8
15
1
Updated Jul 29, 2025
rapids_singlecell
Public
rapids_singlecell: GPU-accelerated framework for scRNA analysis
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Python
222
MIT
28
14
4
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scanpy
Public
Single-cell analysis in Python. Scales to >100M cells.
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25
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55
7
10
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4
0
2
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81
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12
22
1
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prelude-runner
Public
Jupyter notebook runner that executes preludes before each cell
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Python
1
Apache-2.0
0
1
0
Updated Jul 29, 2025
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