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ekernf01 (Eric Kernfeld) · GitHub
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Eric Kernfeld ekernf01
PhD student at JHU BME @CahanLab and @battle-lab . Genomic data analysis and related areas. Blog: https://ekernf01.github.io
Highlights
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Pinned Loading
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perturbation_benchmarking
perturbation_benchmarking PublicComparing performance across many methodological dimensions among tools that predict RNA after TF knockdowns and overexpression.
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MatrixLazyEval
MatrixLazyEval PublicR package for lazy matrices: keep sparse things sparse for a low memory footprint and efficient matvecs.
R 4
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maehrlab/thymusatlasanalysis
maehrlab/thymusatlasanalysis PublicAnalysis for our 2018 Immunity paper (cell atlas of mouse thymus development).
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maehrlab/de_screen_analysis
maehrlab/de_screen_analysis PublicCode to reproduce our analyses from the definitive endoderm screen, April 2019 Cell Reports
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